Bioinformatic Specialist – Lim Lab
Core
Part-time bioinformatics specialist analyzing large-scale human datasets and experimental genomic data to investigate reproductive health and disease outcomes.
Role type
Part-time IC bioinformatics specialist (reproductive immunology)
Builds
Analytical pipelines and insights connecting human cohort data with single-cell, spatial, and epigenomic datasets
Domain
Reproductive biology, immunology, human genomics
Deliverable
production ML models | dashboards & analysis
Required skills
R, Python, large-scale genomic data analysis, statistical reasoning, reproducible workflow development
Preferred skills
single-cell RNA-seq analysis, scATAC-seq, spatial transcriptomics (Xenium), epigenomic analysis (CUT&Tag), microbiome sequencing analysis
Technologies
R, Python, Xenium, CUT&Tag
Responsibilities
Analyze large-scale human datasets to investigate associations between reproductive history, immune phenotypes, and disease outcomes; Develop and apply reproducible computational workflows for large-scale human data analysis; Collaborate with experimental scientists to design analytical strategies for high-dimensional datasets; Analyze and integrate single-cell RNA-seq, scATAC-seq, and other single-cell or multi-omic datasets; Analyze spatial transcriptomic datasets, including platforms such as Xenium; Analyze epigenomic datasets, including CUT&Tag and related approaches; Analyze microbiome sequencing datasets and integrate microbiome features with immune and tissue phenotypes
Seniority
Part-time, hands-on IC
