Bioinformatiker till enheten Exodiab
Core
Bioinformatician providing computational support, developing pipelines, and analyzing multi-omics data for diabetes research at Lund University Diabetes Centre.
Role type
Senior IC bioinformatician (genomics & multi-omics)
Builds
Bioinformatics/computational pipelines for genomics, epigenomics, transcriptomics, proteomics, metabolomics, and clinical data
Domain
Biomedical research / Diabetes / Genomics
Deliverable
production ML models | product features | dashboards & analysis
Required skills
R, Bash/UNIX, biostatistics, machine learning (scikit-learn, Keras, TensorFlow), handling omics data (single-cell, bulk, spatial RNA-seq, ChIP-seq, DNA methylation, eQTL, immunorepertoires), data visualization, public biological databases
Preferred skills
Reproducible research tools (R Markdown/Quarto, Git, Conda, Snakemake), AI/deep learning, multi-omics integration, metagenomics, (phospho)proteomics, Python/Java/Perl, teaching
Technologies
R, Bash, scikit-learn, Keras, TensorFlow, Git, Conda, Snakemake
Responsibilities
Develop and maintain bioinformatics pipelines for varied data types; perform quality control, processing, and analysis of Human Tissue Laboratory data; prepare manuscripts with state-of-the-art analyses and publication-quality figures; consult with non-bioinformatician researchers; train staff on bioinformatics tools
Seniority
Senior, hands-on IC