Senior Bioinformatics Research Scientist / Bioinformatics Research Scientist Neurobiology and Brain Tumor Program (NBTP)
Core
Design, develop, and operate data analysis pipelines for multi-omics datasets (bulk, single-cell, spatial) from children with malignant brain cancer to translate lab findings into clinical practice.
Role type
Senior Bioinformatics Research Scientist (Translational Oncology)
Builds
Data analysis pipelines, databases, and computational tools for cancer genomics and epigenomics.
Domain
Cancer genomics, human genetics, transcriptomics, epigenetics, and single-cell/spatial omics.
Deliverable
production ML models
Required skills
NGS data analysis, machine learning, data integration and harmonization, statistical analysis, algorithm implementation, database development, experimental design, mathematical modeling, pipeline development, reproducibility tools (Nextflow/Snakemake), version control (Git), R, Python, HPC environment.
Preferred skills
Long-read sequencing analysis, spatial transcriptomics, quantitative proteomics, building tools and developing pipelines, training on bioinformatics software.
Technologies
Illumina, PacBio, Oxford Nanopore, R, Python, Nextflow, Snakemake, Git, HPC.
Responsibilities
Design and prepare materials and courses for training on bioinformatics software; Act as a liaison between end-users, software developers, and different departments; Lead the development, implementation, installation, and maintenance of databases; Develop programs to assist in the analysis of data within the databases.
Seniority
Senior, hands-on IC with project management