E11 Bio - Associate Computational Scientist
Core
Develop, maintain, and optimize workflows and infrastructure to process petabyte-scale brain mapping data from microscopy acquisition to finished volumes.
Role type
Associate computational scientist (infrastructure & data pipelines)
Builds
Data processing pipelines, QC dashboards, and agentic lab automation tools for neuroscience research
Domain
Neuroscience / Connectomics / Scientific Computing
Required skills
Python, Linux administration, hardware troubleshooting, AI-assisted development (agentic coding), data science fundamentals (numpy, scipy), software development practices
Preferred skills
IT infrastructure (servers, storage, networking), HPC/cloud computing, containerization (Docker/Apptainer), wet-lab software integration, reproducible workflows (CI/CD, GitOps), neurotech/BCI background
Technologies
Python, Git, Linux, numpy, scipy, Docker, Apptainer, CI/CD, GitOps
Responsibilities
Operate automated pipelines for petabyte-scale volumetric microscopy data; maintain on-prem servers, storage, and networking; collaborate with remote engineers for infrastructure support; build tools for QC and live dashboards; train lab scientists on software; maintain pipeline tracking dashboards; contribute to AI-driven lab automation projects
Seniority
Associate, hands-on IC
