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Head of Automated Small Molecule Synthesis

Boston, MA💼 Full-time💰 $177,000–$177,000🗓 2026-06-03 → 2026-07-31

Core

Leading the strategy and execution of fully automated, robotic small molecule synthesis platforms to accelerate AI-integrated Design–Make–Test–Analyze (DMTA) cycles for rapid drug discovery.

Role type

Director-level Head of Automated Small Molecule Synthesis

Builds

Automated synthesis workflows, robotic reaction screening, parallel synthesis, and purification systems for Takeda's Discovery Automation & Robotics initiative.

Domain

Pharmaceutical R&D, small-molecule discovery, chemical automation, AI-driven design-make-test-analyze loops.

Deliverable

production ML models | product features

Required skills

Deep medicinal chemistry knowledge (SAR, SBDD, cheminformatics, ADME/PK), building and scaling lab/chemical process automation, leading cross-functional R&D teams, proficiency with automated synthesis platforms (robotic reaction screening, parallel synthesis, purification), experience with AI-driven DMTA and autonomous design-make loops, familiarity with scheduling software, LIMS/ELN, and data pipeline tools.

Preferred skills

Experience with liquid-handling robotics, continuous flow, microreactors, smart reactors, generative chemistry tools, high-throughput experimentation (HTE), flow chemistry, automated purification, ELN/LIMS integration, scheduling/orchestration systems.

Technologies

Robotic reaction screening, parallel synthesis, purification systems (flash/Prep-HPLC), liquid-handling robotics, continuous flow, microreactors, smart reactors, generative chemistry tools, ELN/LIMS, scheduling/orchestration systems.

Responsibilities

Define and execute automation strategy aligning with discovery goals; prioritize automation investments in equipment, software, and talent; establish closed-loop DMTA vision integrating robotics, digital data capture, and AI/ML; design end-to-end automated workflows for reaction scouting, parallel synthesis, scale-out, and purification; standardize method libraries and digital SOPs; continuously evaluate and integrate new technologies; accelerate DMTA cycles through HTE and automated purification; drive reliability engineering, preventive maintenance, and EHS/machine safety/cybersecurity integration; scale workflows from prototype to routine; engage externally through patents, publications, and presentations.

Seniority

Director-level, hands-on IC with strategic leadership

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