Bioinformatician
Core
Develop AI-driven data integration pipelines and tools to connect molecular dynamics simulation data with structural biology resources and knowledge bases.
Role type
Senior Bioinformatician (Data Integration & AI)
Builds
FAIR data infrastructure, metadata enrichment workflows, and APIs for structural biology and molecular dynamics datasets.
Domain
Structural Biology, Molecular Dynamics, Bioinformatics, AI/ML
Deliverable
production ML models | infrastructure
Required skills
NLP/LLM-based scientific literature mining, Python, Linux environments, Git, CI/CD, FAIR data principles, sequence/structure/functional annotations, data integration pipelines
Preferred skills
Graph databases, REST APIs, containerisation, workflow management systems (Nextflow), data visualisation
Technologies
Python, Linux, Git, Neo4J, Nextflow, REST APIs
Responsibilities
Design and implement data integration pipelines connecting MDDB with life science resources; Develop AI/ML approaches for extracting metadata from scientific literature; Extend and maintain the SIFTS infrastructure; Develop software tools, APIs, and documentation for FAIR data integration; Collaborate with domain experts and international partners; Support FAIRification and standardisation of MD datasets.
Seniority
Senior, hands-on IC
