Senior Bioinformatics & Genomics Data System Engineer
Core
Design, develop, test, deploy, maintain, and update software tools, data platforms, cloud platforms, automation systems, and analytics systems for a bioinformatics and genomics production engineering team.
Role type
Senior Bioinformatics & Genomics Data System Engineer (DevOps)
Builds
Software tools, data/cloud/automation systems, and analytics systems for bioinformatics and genomics applications
Domain
Bioinformatics, Genomics, Cloud Infrastructure, DevOps
Deliverable
production ML models
Required skills
Python, AWS services (Batch, ECS, S3, EC2, HealthOmics), RDBMS (PostgreSQL, MySQL), Linux command line, Git, SDLC methodologies, system performance optimization, bioinformatics file formats (BCL, FASTQ, BAM, VCF)
Preferred skills
Advanced degrees in Computer Science, Software Engineering, or Bioinformatics
Technologies
AWS, Python, PostgreSQL, MySQL, Linux, Git, GitHub, GitLab
Responsibilities
Design system architecture and infrastructure documents, monitor and optimize system performance metrics (network I/O, disk I/O, RAM, CPU), create and maintain technical documentation and training materials, coach team members on new technologies, represent the team in stakeholder meetings
Seniority
Senior, hands-on IC
