Senior Software Engineer, Bioinformatics
Core
Lead architectural evolution of a large-scale, high-throughput germline clinical bioinformatics pipeline for diagnostic variant detection.
Role type
Senior Software Engineer (Production)
Builds
Clinical-grade variant detection modules and optimized bioinformatics pipelines
Domain
Clinical diagnostics / Genomics / Bioinformatics
Deliverable
production ML models | product features
Required skills
Python internals, Linux/Bash scripting, MongoDB architecture, variant calling algorithms, FASTQ/BAM/CRAM/VCF file formats, pytest, software design patterns
Preferred skills
TypeScript, Rust (Maturin/PyO3), C++, relational database design, data migrations
Technologies
Python, MongoDB, Linux, Bash, pytest, Typescript, Rust, C++, Maturin, PyO3
Responsibilities
Identify and resolve performance bottlenecks in primary, secondary, and tertiary pipelines; automate business processes to scale sample throughput; design, develop, validate, and deploy algorithms for clinical-grade variant detection
Seniority
Senior, hands-on IC
