Bioinformatician II
Core
Mid-level bioinformatician supporting clinical reporting, NGS pipeline monitoring, assay validation, and regulatory compliance in a regulated healthcare environment.
Role type
Mid-level IC bioinformatician (clinical NGS)
Builds
Clinical variant reports, validated NGS pipelines, and regulatory-compliant data deliverables
Domain
Healthcare diagnostics + NGS bioinformatics
Deliverable
production ML models | product features
Required skills
NGS workflow management, Python/Java, Linux/UNIX shell scripting, statistical analysis, data visualization (MATLAB/R), cloud computing (DNAnexus), version control, large-scale data analysis
Preferred skills
AWS, 2+ years in large-scale NGS operations, CLIA/CAP/FDA regulatory experience
Technologies
Python, Java, Linux, MATLAB, R, DNAnexus, Cromwell/WDL, Snakemake
Responsibilities
Monitor and review variant calls and pipeline outputs; investigate quality control issues; participate in assay validation and regulatory inspections; develop front ends for analysis tools and build automated workflows; prototype new bioinformatics resources; collaborate with PIs and researchers; mentor junior staff
Seniority
Mid-level, hands-on IC
