Informatiker / Medizininformatiker / Bioinformatiker (m/w/d) im Datenintegrationszentrum und Biobank
Core
Designing the future of the biobank by networking data, creating interoperability, and enabling clinical research at the University Medical Center Halle.
Role type
Senior IC medical informatics engineer (data integration)
Builds
National biobank platform, FHIR repository, and interoperable interfaces between biobank systems and clinical research IT systems
Domain
Healthcare + Bioinformatics
Required skills
HL7 FHIR standards, ETL processes, Python, SQL, REST APIs, JSON, HL7, LOINC, SNOMED, MS-SQL, MySQL, Postman
Preferred skills
Experience with scientific research projects
Technologies
HL7 FHIR, CentraXX, MS-SQL, MySQL, Python, SQL, REST, JSON, HTTP, Postman
Responsibilities
Conceptualizing, implementing, and maintaining HL7 FHIR interfaces between the local biobank and the data integration center; Supporting the application management of the CentraXX biobank information system; Technically integrating biobank systems with clinical and research IT systems; Preparing and converting biobank-related metadata into a central FHIR repository using ETL processes; Implementing validation and transformation mechanisms to ensure consistent, standardized data; Cooperating closely with application/network specialists and clinical researchers
Seniority
Senior, hands-on IC